Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Gm20074-201ENSMUST00000208144 484 ntBASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim58Q5NCC9 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Gm3213-201ENSMUST00000219296 441 ntBASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Gm25147-201ENSMUST00000083030 105 ntBASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim58Q5NCC9 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.77□□□□□ -1.65
Trim58Q5NCC9 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Mir193b-201ENSMUST00000103784 79 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm22988-201ENSMUST00000122759 144 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Mir6963-201ENSMUST00000183535 71 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Mir7074-201ENSMUST00000183884 63 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm5829-201ENSMUST00000191383 351 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm18660-201ENSMUST00000199542 629 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm44871-201ENSMUST00000207821 497 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Gm45553-201ENSMUST00000209929 507 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.76□□□□□ -1.65
Trim58Q5NCC9 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim58Q5NCC9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Snord66-201ENSMUST00000104051 75 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm9427-201ENSMUST00000116187 651 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Mir466i-201ENSMUST00000116924 121 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm15926-201ENSMUST00000120492 550 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm14875-201ENSMUST00000120881 319 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm13460-201ENSMUST00000121274 353 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm3757-201ENSMUST00000125878 675 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm23123-201ENSMUST00000157648 144 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm25332-201ENSMUST00000158038 105 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm24727-201ENSMUST00000158231 144 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm28967-201ENSMUST00000187351 281 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm6057-201ENSMUST00000195927 314 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Gm43559-201ENSMUST00000198755 466 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Trim58Q5NCC9 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm23273-201ENSMUST00000104058 135 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm4910-201ENSMUST00000119605 366 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm12884-201ENSMUST00000120371 325 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm12731-201ENSMUST00000120932 268 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm14840-201ENSMUST00000122135 594 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm23228-201ENSMUST00000157296 270 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm19427-201ENSMUST00000183619 208 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm17951-201ENSMUST00000198536 496 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm43604-201ENSMUST00000199799 705 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm44869-201ENSMUST00000208836 357 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm18387-201ENSMUST00000220333 702 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 AV026068-224ENSMUST00000224827 928 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Gm26165-201ENSMUST00000083791 138 ntBASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms