Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm24117-201ENSMUST00000103973 133 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm24640-201ENSMUST00000116949 126 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm22626-201ENSMUST00000116990 126 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm11908-201ENSMUST00000117755 347 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm6893-201ENSMUST00000118385 522 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm15212-201ENSMUST00000122403 466 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm23837-201ENSMUST00000122656 286 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm24914-201ENSMUST00000157285 313 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Mir3471-2-201ENSMUST00000174896 102 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm24761-201ENSMUST00000179589 127 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm24488-201ENSMUST00000179934 127 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm25701-201ENSMUST00000179988 127 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm26431-201ENSMUST00000180199 127 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 AC114585.1-201ENSMUST00000228080 3680 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm12448-201ENSMUST00000118852 655 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm12686-201ENSMUST00000120546 397 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm12872-201ENSMUST00000121835 320 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm23774-201ENSMUST00000158990 131 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm28604-201ENSMUST00000186629 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm28566-201ENSMUST00000186714 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm28194-201ENSMUST00000187412 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm28886-202ENSMUST00000187889 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm28554-202ENSMUST00000189175 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm29213-202ENSMUST00000189703 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm28851-202ENSMUST00000189757 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm28461-201ENSMUST00000190023 484 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm8158-201ENSMUST00000219220 465 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm8249-201ENSMUST00000219225 465 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm7198-201ENSMUST00000219635 1074 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm8112-201ENSMUST00000219637 465 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 AC138765.1-201ENSMUST00000228657 385 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm22229-201ENSMUST00000082987 108 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm24610-201ENSMUST00000083270 109 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm15102-201ENSMUST00000118740 1502 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Gm44440-201ENSMUST00000203139 2373 ntBASIC10.06□□□□□ -0.8
Trim41Q5NCC3 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm24586-201ENSMUST00000116695 89 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm11268-201ENSMUST00000118347 267 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm14082-201ENSMUST00000118582 801 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm11890-201ENSMUST00000119585 417 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm15387-201ENSMUST00000120421 648 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm16100-201ENSMUST00000120489 231 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm23213-201ENSMUST00000122715 313 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm6956-201ENSMUST00000134724 546 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm22597-201ENSMUST00000157602 80 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm23277-201ENSMUST00000157914 136 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm24976-201ENSMUST00000158972 135 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm15812-201ENSMUST00000162331 748 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm3141-201ENSMUST00000168726 499 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm17907-201ENSMUST00000173150 710 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm38183-201ENSMUST00000193189 205 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm5842-201ENSMUST00000195073 622 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm5284-201ENSMUST00000199053 903 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms