Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm19599-201ENSMUST00000218898 358 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm23063-201ENSMUST00000102350 93 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm26019-201ENSMUST00000104407 119 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm25295-201ENSMUST00000122794 306 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm17038-201ENSMUST00000166586 494 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Mir7653-201ENSMUST00000184358 61 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm28655-201ENSMUST00000191538 692 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm17935-201ENSMUST00000196649 772 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm43237-201ENSMUST00000196835 1044 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm5309-201ENSMUST00000197416 677 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm19726-201ENSMUST00000205008 240 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm18598-201ENSMUST00000207724 597 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm46190-201ENSMUST00000219650 427 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 AC131745.2-201ENSMUST00000225736 565 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim40Q3UWA4 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Mir706-201ENSMUST00000102262 84 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm22020-201ENSMUST00000104358 136 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm15159-201ENSMUST00000117062 764 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm8569-201ENSMUST00000117630 647 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm12889-201ENSMUST00000118684 241 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm11404-201ENSMUST00000120872 494 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm13489-201ENSMUST00000121234 971 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm15905-201ENSMUST00000137042 298 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm7846-201ENSMUST00000145844 274 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm16129-201ENSMUST00000152628 486 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm23743-201ENSMUST00000157389 274 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Mir6921-201ENSMUST00000183719 80 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm9775-201ENSMUST00000189402 331 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm28788-201ENSMUST00000189717 375 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm29558-201ENSMUST00000190134 375 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm6140-201ENSMUST00000192494 966 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm44371-201ENSMUST00000204148 467 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm44795-201ENSMUST00000205496 319 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm44857-201ENSMUST00000208331 196 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm29785-201ENSMUST00000217033 383 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Gm7530-201ENSMUST00000218466 605 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim40Q3UWA4 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.92□□□□□ -1.78
Trim40Q3UWA4 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms