Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm11281-201ENSMUST00000141391 576 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm22531-201ENSMUST00000158819 140 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm3030-201ENSMUST00000163410 516 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm44972-201ENSMUST00000206419 406 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm12401-201ENSMUST00000118435 228 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm13118-201ENSMUST00000120402 549 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm12900-201ENSMUST00000120919 573 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm14126-201ENSMUST00000122345 395 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm22480-201ENSMUST00000122568 128 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm23897-201ENSMUST00000158110 158 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm23198-201ENSMUST00000158811 91 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Mir6408-201ENSMUST00000183643 91 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm38098-201ENSMUST00000194115 241 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm7041-201ENSMUST00000201227 524 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm44294-201ENSMUST00000205090 728 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm44611-201ENSMUST00000207507 355 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm8748-201ENSMUST00000211125 587 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm39197-201ENSMUST00000212069 457 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm3829-201ENSMUST00000222362 619 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm23736-201ENSMUST00000082553 75 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm23518-201ENSMUST00000082835 153 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.18□□□□□ -1.74
Upf3aQ3ULJ3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Mir147-201ENSMUST00000102354 79 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm25764-201ENSMUST00000104092 134 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm11372-201ENSMUST00000117348 570 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm6079-201ENSMUST00000121356 404 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm23540-201ENSMUST00000157543 164 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm23865-201ENSMUST00000157723 97 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm27254-201ENSMUST00000183926 517 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm27828-201ENSMUST00000184108 119 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm27392-201ENSMUST00000185041 101 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm37001-201ENSMUST00000193377 190 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm29704-201ENSMUST00000196011 253 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm43892-201ENSMUST00000204373 265 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm18899-201ENSMUST00000217663 546 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm5265-201ENSMUST00000076828 342 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.17□□□□□ -1.74
Upf3aQ3ULJ3 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms