Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm15076-201ENSMUST00000117076 474 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm8666-201ENSMUST00000117517 292 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm13607-201ENSMUST00000117875 539 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm12372-201ENSMUST00000121654 768 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm23499-201ENSMUST00000157736 268 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm24111-201ENSMUST00000175491 97 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Trbv11-201ENSMUST00000194354 260 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm45727-201ENSMUST00000212886 572 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm25810-201ENSMUST00000082752 108 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm25005-201ENSMUST00000083812 156 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm10780-201ENSMUST00000099459 285 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.99□□□□□ -1.77
Trafd1Q3UDK1 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm15180-201ENSMUST00000117745 492 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm7618-201ENSMUST00000121643 171 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm23753-201ENSMUST00000157575 149 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm18415-201ENSMUST00000177464 647 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Mir6996-201ENSMUST00000183922 61 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm28396-201ENSMUST00000190309 379 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm45689-201ENSMUST00000210522 133 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm26072-201ENSMUST00000083135 107 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trafd1Q3UDK1 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Mir551b-201ENSMUST00000102165 98 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm22269-201ENSMUST00000104002 130 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm14473-201ENSMUST00000122269 557 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm22204-201ENSMUST00000122654 327 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm24441-201ENSMUST00000157235 281 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm25456-201ENSMUST00000157952 109 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm38270-201ENSMUST00000192721 407 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm37501-201ENSMUST00000192830 691 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm42593-201ENSMUST00000198469 377 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm9245-201ENSMUST00000200528 983 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms