Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Brf2Q3UAW9 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Brf2Q3UAW9 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Brf2Q3UAW9 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Brf2Q3UAW9 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm22020-201ENSMUST00000104358 136 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm12571-201ENSMUST00000118132 243 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm13087-201ENSMUST00000118298 256 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm6214-201ENSMUST00000178845 541 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm6501-201ENSMUST00000187178 916 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm43276-201ENSMUST00000199712 364 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm44879-201ENSMUST00000207007 503 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm18306-201ENSMUST00000207338 569 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm45857-201ENSMUST00000212207 356 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm45727-201ENSMUST00000212886 572 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Supt4b-201ENSMUST00000214434 351 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Brf2Q3UAW9 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.28□□□□□ -1.73
Brf2Q3UAW9 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Brf2Q3UAW9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm22498-201ENSMUST00000104497 86 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm12760-201ENSMUST00000117861 482 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm8051-201ENSMUST00000120464 466 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm9001-201ENSMUST00000121642 399 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm11233-201ENSMUST00000122357 634 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm22818-201ENSMUST00000157446 104 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm22817-201ENSMUST00000157448 356 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm24289-201ENSMUST00000157629 135 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm21850-201ENSMUST00000179792 359 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm29138-201ENSMUST00000191444 348 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm37599-201ENSMUST00000193067 489 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm42438-201ENSMUST00000197832 974 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm43142-201ENSMUST00000198670 361 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm44184-201ENSMUST00000204290 132 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm44634-201ENSMUST00000206119 152 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm18410-201ENSMUST00000207199 577 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm6112-201ENSMUST00000208037 629 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Gm18892-201ENSMUST00000217628 881 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf2Q3UAW9 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.27□□□□□ -1.73
Brf2Q3UAW9 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms