Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm38015-201ENSMUST00000193048 188 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm45236-201ENSMUST00000208632 229 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC6.39□□□□□ -1.39
Col9a1Q05722 AC125223.1-203ENSMUST00000225304 498 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm5347-201ENSMUST00000210542 2327 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm24121-201ENSMUST00000102029 106 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm15162-201ENSMUST00000119325 283 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm5937-201ENSMUST00000119715 643 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm11430-201ENSMUST00000121317 217 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm26279-201ENSMUST00000157095 102 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm20615-201ENSMUST00000177503 705 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Mir6343-201ENSMUST00000183584 84 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm27152-201ENSMUST00000183828 99 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Mir6346-201ENSMUST00000183982 81 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm27545-201ENSMUST00000184755 202 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm37493-201ENSMUST00000193167 433 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm10813-201ENSMUST00000099936 90 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm37674-201ENSMUST00000194177 1834 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.38□□□□□ -1.39
Col9a1Q05722 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC6.38□□□□□ -1.39
Col9a1Q05722 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col9a1Q05722 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col9a1Q05722 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.37□□□□□ -1.39
Col9a1Q05722 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Mir701-201ENSMUST00000102208 109 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm22657-201ENSMUST00000104197 132 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm14803-201ENSMUST00000117163 361 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm13153-201ENSMUST00000120969 637 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm26149-201ENSMUST00000157432 108 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm25722-201ENSMUST00000157498 279 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm2962-201ENSMUST00000159266 336 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm16545-201ENSMUST00000161968 463 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Mir5128-201ENSMUST00000175217 84 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm28413-201ENSMUST00000189369 291 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm28640-201ENSMUST00000190918 550 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm43212-201ENSMUST00000198208 394 ntBASIC6.37□□□□□ -1.39
Col9a1Q05722 Gm42665-201ENSMUST00000202100 586 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms