Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm43437-201ENSMUST00000198535 3955 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm24079-201ENSMUST00000104352 132 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm13331-201ENSMUST00000117500 448 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm15025-201ENSMUST00000118434 418 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm13213-201ENSMUST00000119668 474 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.72□□□□□ -1.65
Col8a1Q00780 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm16254-201ENSMUST00000131528 730 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm4487-201ENSMUST00000150617 442 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm24192-201ENSMUST00000157978 145 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm27541-201ENSMUST00000184078 122 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm42643-201ENSMUST00000200504 279 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm6719-201ENSMUST00000202067 335 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm3442-201ENSMUST00000216808 710 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 AC091783.2-201ENSMUST00000224626 740 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr575-201ENSMUST00000084812 957 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 AC155167.2-201ENSMUST00000226127 1945 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col8a1Q00780 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm44043-201ENSMUST00000203426 3253 ntBASIC4.71□□□□□ -1.65
Col8a1Q00780 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC4.71□□□□□ -1.65
Col8a1Q00780 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
Col8a1Q00780 AC124516.3-201ENSMUST00000221302 3613 ntBASIC4.71□□□□□ -1.65
Col8a1Q00780 AC120375.1-201ENSMUST00000227034 3612 ntBASIC4.71□□□□□ -1.65
Col8a1Q00780 AC158982.1-205ENSMUST00000227339 1876 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm42781-201ENSMUST00000201317 2719 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 AC124579.1-201ENSMUST00000223468 2520 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm23274-201ENSMUST00000104056 130 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm24125-201ENSMUST00000104105 137 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm25565-201ENSMUST00000104605 105 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm14050-201ENSMUST00000117052 346 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm9850-201ENSMUST00000117916 227 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm14594-201ENSMUST00000118052 537 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm14590-201ENSMUST00000118934 537 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm9225-201ENSMUST00000121921 836 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm23171-201ENSMUST00000157159 264 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm23473-201ENSMUST00000158883 116 ntBASIC4.71□□□□□ -1.66
Col8a1Q00780 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col8a1Q00780 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms