Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm13550-201ENSMUST00000118185 525 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm14871-201ENSMUST00000119056 194 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm12873-201ENSMUST00000119988 422 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.51□□□□□ -1.53
Hmgb1P63158 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm29288-201ENSMUST00000191582 901 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm44162-201ENSMUST00000203543 544 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm18468-201ENSMUST00000207321 369 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm18470-201ENSMUST00000207467 420 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm18465-201ENSMUST00000207468 369 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm18464-201ENSMUST00000207803 420 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm18458-201ENSMUST00000207908 369 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm18461-201ENSMUST00000208421 420 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm45874-201ENSMUST00000212423 346 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.51□□□□□ -1.53
Hmgb1P63158 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb1P63158 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hmgb1P63158 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb1P63158 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb1P63158 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm14046-201ENSMUST00000119389 509 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm12739-201ENSMUST00000119769 382 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm9442-201ENSMUST00000194242 319 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm43276-201ENSMUST00000199712 364 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm43554-201ENSMUST00000199987 186 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm39197-201ENSMUST00000212069 457 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm9973-202ENSMUST00000220926 166 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb1P63158 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Mir504-201ENSMUST00000093602 79 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb1P63158 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.5□□□□□ -1.53
Hmgb1P63158 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.49□□□□□ -1.53
Hmgb1P63158 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb1P63158 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.49□□□□□ -1.53
Hmgb1P63158 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hmgb1P63158 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hmgb1P63158 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.49□□□□□ -1.53
Hmgb1P63158 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb1P63158 Gm23691-201ENSMUST00000101878 107 ntBASIC5.49□□□□□ -1.53
Hmgb1P63158 Mir92b-201ENSMUST00000102300 83 ntBASIC5.49□□□□□ -1.53
Hmgb1P63158 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb1P63158 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Hmgb1P63158 Gm15110-201ENSMUST00000117545 881 ntBASIC5.49□□□□□ -1.53
Hmgb1P63158 Gm8595-201ENSMUST00000118250 630 ntBASIC5.49□□□□□ -1.53
Hmgb1P63158 Gm15012-201ENSMUST00000119176 106 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms