Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm25103-201ENSMUST00000122671 318 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm25807-201ENSMUST00000122783 305 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm25667-201ENSMUST00000157701 275 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm24944-201ENSMUST00000158330 128 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm27342-201ENSMUST00000183530 109 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm28779-201ENSMUST00000189678 323 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm37399-201ENSMUST00000195224 416 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm19457-201ENSMUST00000200995 448 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm29781-201ENSMUST00000203862 478 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.19□□□□□ -1.58
Shmt1P50431 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm22220-201ENSMUST00000082671 149 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm23097-201ENSMUST00000083448 105 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Mir325-201ENSMUST00000083491 98 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm22826-201ENSMUST00000083774 165 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm26176-201ENSMUST00000083795 105 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm24490-201ENSMUST00000083803 98 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Mir292-201ENSMUST00000104847 82 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Shmt1P50431 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm12880-201ENSMUST00000120652 494 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm13867-201ENSMUST00000120844 395 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm24628-201ENSMUST00000122761 289 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm26349-201ENSMUST00000157530 130 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm22841-201ENSMUST00000158443 62 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm23115-201ENSMUST00000158480 108 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Shmt1P50431 Mir6341-201ENSMUST00000183490 121 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm5252-201ENSMUST00000189030 909 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm29332-201ENSMUST00000190829 227 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm37869-201ENSMUST00000193385 595 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm37243-201ENSMUST00000193407 595 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm42465-201ENSMUST00000197036 492 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm44623-201ENSMUST00000207934 434 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm18997-201ENSMUST00000216353 822 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Shmt1P50431 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm23378-201ENSMUST00000082942 107 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.18□□□□□ -1.58
Shmt1P50431 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Shmt1P50431 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Shmt1P50431 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms