Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm24534-201ENSMUST00000157949 291 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Gm23666-201ENSMUST00000158053 116 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Cdx2P43241 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cdx2P43241 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Cdx2P43241 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Gm19427-201ENSMUST00000183619 208 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Gm7439-201ENSMUST00000214053 835 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Gm5176-201ENSMUST00000218244 1227 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cdx2P43241 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cdx2P43241 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cdx2P43241 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.71□□□□□ -1.82
Cdx2P43241 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cdx2P43241 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cdx2P43241 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cdx2P43241 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cdx2P43241 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Cdx2P43241 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Gm11262-201ENSMUST00000119326 833 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Gm12577-201ENSMUST00000119701 574 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Mir1934-201ENSMUST00000158127 83 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Cdx2P43241 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Cdx2P43241 Gm27254-201ENSMUST00000183926 517 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Gm27160-201ENSMUST00000184837 199 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Gm37355-201ENSMUST00000193345 606 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Gm5185-201ENSMUST00000080271 619 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Mir30e-201ENSMUST00000083475 92 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdx2P43241 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cdx2P43241 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdx2P43241 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdx2P43241 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdx2P43241 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Cdx2P43241 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.7□□□□□ -1.82
Cdx2P43241 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm24376-201ENSMUST00000104399 127 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm15785-201ENSMUST00000119145 694 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm8757-201ENSMUST00000119660 372 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm13532-201ENSMUST00000120373 240 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm13677-201ENSMUST00000120739 595 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm14775-201ENSMUST00000122089 310 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.69□□□□□ -1.82
Cdx2P43241 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdx2P43241 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm28190-201ENSMUST00000189766 722 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm37828-201ENSMUST00000192496 432 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm17966-201ENSMUST00000193453 594 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm44355-201ENSMUST00000200417 104 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Gm45006-201ENSMUST00000206078 690 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Cdx2P43241 AC159256.1-201ENSMUST00000224298 1039 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdx2P43241 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdx2P43241 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Cdx2P43241 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.69□□□□□ -1.82
Cdx2P43241 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cdx2P43241 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdx2P43241 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.69□□□□□ -1.82
Cdx2P43241 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx2P43241 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx2P43241 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cdx2P43241 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx2P43241 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx2P43241 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Cdx2P43241 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.68□□□□□ -1.82
Cdx2P43241 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx2P43241 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx2P43241 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms