Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm13386-201ENSMUST00000117677 124 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Gm6969-201ENSMUST00000140065 342 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Gm25908-201ENSMUST00000157624 98 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Gm23585-201ENSMUST00000157656 102 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.96□□□□□ -1.62
Traf1P39428 Gm23215-201ENSMUST00000178153 121 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.96□□□□□ -1.62
Traf1P39428 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Traf1P39428 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Traf1P39428 Gm42593-201ENSMUST00000198469 377 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Traf1P39428 Gm45317-201ENSMUST00000210385 223 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Gm45523-201ENSMUST00000210712 799 ntBASIC4.96□□□□□ -1.62
Traf1P39428 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Traf1P39428 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Traf1P39428 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Traf1P39428 Gm23975-201ENSMUST00000082685 106 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Traf1P39428 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Traf1P39428 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Traf1P39428 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Traf1P39428 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Traf1P39428 Gm11708-201ENSMUST00000119530 832 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm12103-201ENSMUST00000121892 362 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm8200-201ENSMUST00000122390 222 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm25185-201ENSMUST00000157754 96 ntBASIC4.95□□□□□ -1.62
Traf1P39428 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Traf1P39428 Gm18522-201ENSMUST00000173947 650 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.95□□□□□ -1.62
Traf1P39428 Gm27695-201ENSMUST00000184301 91 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.95□□□□□ -1.62
Traf1P39428 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Traf1P39428 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.95□□□□□ -1.62
Traf1P39428 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm43604-201ENSMUST00000199799 705 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm44650-201ENSMUST00000206929 194 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm46138-201ENSMUST00000215294 426 ntBASIC4.95□□□□□ -1.62
Traf1P39428 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Gm26449-201ENSMUST00000082452 104 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Mir215-201ENSMUST00000083628 112 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Traf1P39428 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Traf1P39428 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Traf1P39428 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Traf1P39428 Gm43216-201ENSMUST00000196295 1333 ntBASIC4.95□□□□□ -1.62
Traf1P39428 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Traf1P39428 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Traf1P39428 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.94□□□□□ -1.62
Traf1P39428 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Traf1P39428 Mir105-201ENSMUST00000104655 80 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm15076-201ENSMUST00000117076 474 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.94□□□□□ -1.62
Traf1P39428 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Gm22968-201ENSMUST00000157955 118 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm25520-201ENSMUST00000158389 118 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm9890-201ENSMUST00000171867 537 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.94□□□□□ -1.62
Traf1P39428 Gm4854-201ENSMUST00000185902 574 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm37300-201ENSMUST00000193327 280 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.94□□□□□ -1.62
Traf1P39428 Gm33973-201ENSMUST00000195148 534 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Gm43841-201ENSMUST00000199491 586 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Gm6590-201ENSMUST00000203343 687 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm44137-201ENSMUST00000203670 367 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm44032-201ENSMUST00000204841 166 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm44946-201ENSMUST00000208425 572 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.94□□□□□ -1.62
Traf1P39428 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.94□□□□□ -1.62
Traf1P39428 AC160970.1-201ENSMUST00000219311 475 ntBASIC4.94□□□□□ -1.62
Traf1P39428 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.94□□□□□ -1.62
Traf1P39428 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm7093-201ENSMUST00000223004 581 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Traf1P39428 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Traf1P39428 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Traf1P39428 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
Traf1P39428 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Traf1P39428 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Traf1P39428 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.94□□□□□ -1.62
Traf1P39428 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms