Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22959-201ENSMUST00000122514 303 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm23206-201ENSMUST00000122720 184 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.97□□□□□ -1.45
RaraP11416 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.97□□□□□ -1.45
RaraP11416 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.97□□□□□ -1.45
RaraP11416 Gm22116-201ENSMUST00000158791 141 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RaraP11416 Gm23144-201ENSMUST00000180226 107 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm8941-201ENSMUST00000181451 899 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm7858-201ENSMUST00000190177 622 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm5731-201ENSMUST00000190969 481 ntBASIC5.97□□□□□ -1.45
RaraP11416 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.97□□□□□ -1.45
RaraP11416 Gm45232-201ENSMUST00000207811 162 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm19921-201ENSMUST00000210505 703 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm17990-201ENSMUST00000211728 553 ntBASIC5.97□□□□□ -1.45
RaraP11416 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.97□□□□□ -1.45
RaraP11416 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.97□□□□□ -1.45
RaraP11416 Gm8672-201ENSMUST00000221200 332 ntBASIC5.97□□□□□ -1.45
RaraP11416 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.97□□□□□ -1.45
RaraP11416 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.97□□□□□ -1.45
RaraP11416 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RaraP11416 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.97□□□□□ -1.45
RaraP11416 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
RaraP11416 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
RaraP11416 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.96□□□□□ -1.45
RaraP11416 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RaraP11416 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
RaraP11416 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.96□□□□□ -1.45
RaraP11416 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
RaraP11416 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.96□□□□□ -1.46
RaraP11416 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Gm14772-201ENSMUST00000116562 514 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm9850-201ENSMUST00000117916 227 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm13085-201ENSMUST00000118356 171 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm15364-201ENSMUST00000119618 585 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm13009-201ENSMUST00000121307 267 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.96□□□□□ -1.46
RaraP11416 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.96□□□□□ -1.46
RaraP11416 Gm22136-201ENSMUST00000158751 268 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC5.96□□□□□ -1.46
RaraP11416 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RaraP11416 Gm29231-201ENSMUST00000179850 319 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RaraP11416 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Gm10105-201ENSMUST00000184601 270 ntBASIC5.96□□□□□ -1.46
RaraP11416 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.96□□□□□ -1.46
RaraP11416 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 Gm28098-201ENSMUST00000191361 699 ntBASIC5.96□□□□□ -1.46
RaraP11416 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm9317-201ENSMUST00000197055 862 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm43444-201ENSMUST00000198123 291 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm44360-201ENSMUST00000200081 82 ntBASIC5.96□□□□□ -1.46
RaraP11416 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm2040-201ENSMUST00000202979 289 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm44214-201ENSMUST00000204153 606 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm44870-201ENSMUST00000207291 357 ntBASIC5.96□□□□□ -1.46
RaraP11416 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.96□□□□□ -1.46
RaraP11416 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.96□□□□□ -1.46
RaraP11416 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.96□□□□□ -1.46
RaraP11416 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.96□□□□□ -1.46
RaraP11416 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RaraP11416 Gm23515-201ENSMUST00000082829 107 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm22229-201ENSMUST00000082987 108 ntBASIC5.96□□□□□ -1.46
RaraP11416 Gm24610-201ENSMUST00000083270 109 ntBASIC5.96□□□□□ -1.46
RaraP11416 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
RaraP11416 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.96□□□□□ -1.46
RaraP11416 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RaraP11416 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RaraP11416 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RaraP11416 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RaraP11416 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.95□□□□□ -1.46
RaraP11416 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.95□□□□□ -1.46
RaraP11416 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RaraP11416 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RaraP11416 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RaraP11416 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RaraP11416 Gm12053-201ENSMUST00000119022 252 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm14805-201ENSMUST00000120172 340 ntBASIC5.95□□□□□ -1.46
RaraP11416 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm23430-201ENSMUST00000122490 314 ntBASIC5.95□□□□□ -1.46
RaraP11416 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm3170-201ENSMUST00000168753 850 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms