Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm4736-201ENSMUST00000100870 380 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm13268-201ENSMUST00000117485 433 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm22204-201ENSMUST00000122654 327 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm22588-201ENSMUST00000157510 140 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm22789-201ENSMUST00000157884 130 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm22646-201ENSMUST00000175130 115 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm4644-201ENSMUST00000197587 400 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm18487-201ENSMUST00000215826 878 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm10042-201ENSMUST00000079884 78 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Gm26165-201ENSMUST00000083791 138 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Chmp6P0C0A3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm7363-201ENSMUST00000119883 399 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm22277-201ENSMUST00000157204 277 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Mir1251-201ENSMUST00000175486 84 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Mir6345-201ENSMUST00000184286 128 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm3496-201ENSMUST00000188283 745 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm28267-201ENSMUST00000191093 265 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm2691-201ENSMUST00000203205 901 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm45735-201ENSMUST00000212779 319 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Gm19181-201ENSMUST00000218891 940 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Mir346-201ENSMUST00000083547 98 ntBASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Chmp6P0C0A3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm24318-201ENSMUST00000104490 131 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm15916-201ENSMUST00000118355 736 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm12252-201ENSMUST00000119517 219 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm14605-201ENSMUST00000120599 268 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm13788-201ENSMUST00000120767 601 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm23781-201ENSMUST00000157940 308 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm28872-201ENSMUST00000191518 158 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm18547-201ENSMUST00000192439 811 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm28724-202ENSMUST00000194218 295 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms