Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm42544-201ENSMUST00000197868 3242 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm9894-201ENSMUST00000171257 2904 ntBASIC4.96□□□□□ -1.61
Hoxd3P09027 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxd3P09027 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxd3P09027 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxd3P09027 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxd3P09027 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxd3P09027 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxd3P09027 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Hoxd3P09027 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm43953-201ENSMUST00000203709 2867 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm24120-201ENSMUST00000103978 129 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm26289-201ENSMUST00000104169 131 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm24989-201ENSMUST00000104461 88 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Mir881-201ENSMUST00000104844 78 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm11833-201ENSMUST00000118393 853 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm23430-201ENSMUST00000122490 314 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Mir1907-201ENSMUST00000122509 90 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm25117-201ENSMUST00000157194 144 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm25058-201ENSMUST00000157365 128 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm25057-201ENSMUST00000157366 88 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm26162-201ENSMUST00000157793 132 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm24965-201ENSMUST00000157922 106 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm23894-201ENSMUST00000158107 313 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm25920-201ENSMUST00000158307 99 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm27853-201ENSMUST00000184176 250 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm28163-201ENSMUST00000187099 325 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm37135-201ENSMUST00000192652 534 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC4.96□□□□□ -1.62
Hoxd3P09027 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC4.96□□□□□ -1.62
Hoxd3P09027 AC139568.1-201ENSMUST00000222878 486 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm9386-201ENSMUST00000095195 381 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm43229-201ENSMUST00000201812 1850 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 AC158388.2-201ENSMUST00000223665 1314 ntBASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxd3P09027 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hoxd3P09027 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm18310-201ENSMUST00000206494 3912 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm22374-201ENSMUST00000104583 132 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm15531-201ENSMUST00000118062 252 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm13455-201ENSMUST00000118767 517 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm14101-201ENSMUST00000121502 473 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms