Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm29704-201ENSMUST00000196011 253 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col3a1P08121 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col3a1P08121 Olfr713-201ENSMUST00000098139 975 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col3a1P08121 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Col3a1P08121 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col3a1P08121 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.76□□□□□ -1.65
Col3a1P08121 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col3a1P08121 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col3a1P08121 Gm11385-201ENSMUST00000121513 570 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm15212-201ENSMUST00000122403 466 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm26254-201ENSMUST00000122491 118 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm22889-201ENSMUST00000158639 58 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
Col3a1P08121 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col3a1P08121 Gm26915-201ENSMUST00000183080 748 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.76□□□□□ -1.65
Col3a1P08121 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm37934-201ENSMUST00000192902 402 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm45245-201ENSMUST00000210082 376 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.76□□□□□ -1.65
Col3a1P08121 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col3a1P08121 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col3a1P08121 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm42852-201ENSMUST00000202649 1379 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col3a1P08121 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col3a1P08121 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col3a1P08121 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Col3a1P08121 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.76□□□□□ -1.65
Col3a1P08121 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col3a1P08121 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.76□□□□□ -1.65
Col3a1P08121 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col3a1P08121 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col3a1P08121 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col3a1P08121 Gm14599-201ENSMUST00000120469 474 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Gm3025-201ENSMUST00000163454 489 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Gm2878-201ENSMUST00000170173 486 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Gm26607-201ENSMUST00000180661 867 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Col3a1P08121 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col3a1P08121 Gm28314-201ENSMUST00000191276 345 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Gm43717-201ENSMUST00000198684 310 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC4.75□□□□□ -1.65
Col3a1P08121 Gm18597-201ENSMUST00000209519 694 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Col3a1P08121 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.75□□□□□ -1.65
Col3a1P08121 Gm18387-201ENSMUST00000220333 702 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col3a1P08121 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.75□□□□□ -1.65
Col3a1P08121 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col3a1P08121 Mir30e-201ENSMUST00000083475 92 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Gm23058-201ENSMUST00000093703 107 ntBASIC4.75□□□□□ -1.65
Col3a1P08121 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Col3a1P08121 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col3a1P08121 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col3a1P08121 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Col3a1P08121 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col3a1P08121 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col3a1P08121 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col3a1P08121 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms