Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.87□□□□□ -1.63
Smarce1O54941 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.87□□□□□ -1.63
Smarce1O54941 Mecom-201ENSMUST00000061088 348 ntBASIC4.87□□□□□ -1.63
Smarce1O54941 Gm7204-201ENSMUST00000062591 600 ntBASIC4.87□□□□□ -1.63
Smarce1O54941 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Smarce1O54941 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smarce1O54941 Gm23975-201ENSMUST00000082685 106 ntBASIC4.87□□□□□ -1.63
Smarce1O54941 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smarce1O54941 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Smarce1O54941 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smarce1O54941 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Smarce1O54941 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.87□□□□□ -1.63
Smarce1O54941 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Smarce1O54941 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smarce1O54941 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smarce1O54941 Gm8569-201ENSMUST00000117630 647 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm16053-201ENSMUST00000120511 188 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm14695-201ENSMUST00000121721 282 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm14649-201ENSMUST00000121814 324 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 Gm23387-201ENSMUST00000158586 107 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smarce1O54941 Gm21960-201ENSMUST00000181924 452 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm27355-201ENSMUST00000185045 128 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC4.86□□□□□ -1.63
Smarce1O54941 Gm28745-201ENSMUST00000190069 305 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Smarce1O54941 Gm42539-201ENSMUST00000197009 308 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm43631-201ENSMUST00000202011 369 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm43992-201ENSMUST00000204358 197 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.86□□□□□ -1.63
Smarce1O54941 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smarce1O54941 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smarce1O54941 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smarce1O54941 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smarce1O54941 Gm26176-201ENSMUST00000083795 105 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Smarce1O54941 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smarce1O54941 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Smarce1O54941 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.86□□□□□ -1.63
Smarce1O54941 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smarce1O54941 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Smarce1O54941 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Smarce1O54941 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm15159-201ENSMUST00000117062 764 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm13459-201ENSMUST00000121558 646 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm26320-201ENSMUST00000157742 306 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm24939-201ENSMUST00000158325 137 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm3030-201ENSMUST00000163410 516 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm3339-201ENSMUST00000163462 475 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm17155-201ENSMUST00000165969 473 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm18128-201ENSMUST00000172625 511 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm4842-201ENSMUST00000183237 835 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.85□□□□□ -1.63
Smarce1O54941 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Smarce1O54941 Mir6938-201ENSMUST00000184173 63 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm27690-201ENSMUST00000184596 126 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm22897-201ENSMUST00000197860 128 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm44032-201ENSMUST00000204841 166 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Gm44757-201ENSMUST00000206373 157 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm4263-202ENSMUST00000221392 667 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Smarce1O54941 Gm22043-201ENSMUST00000082993 158 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Smarce1O54941 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Smarce1O54941 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Smarce1O54941 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smarce1O54941 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.85□□□□□ -1.63
Smarce1O54941 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms