Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm15151-201ENSMUST00000117106 177 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm12577-201ENSMUST00000119701 574 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm12880-201ENSMUST00000120652 494 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm23198-201ENSMUST00000158811 91 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm22395-201ENSMUST00000177427 96 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Mir6414-201ENSMUST00000183685 82 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Mir6907-201ENSMUST00000183764 71 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Mir6899-201ENSMUST00000184798 64 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm28625-201ENSMUST00000188309 205 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm28872-201ENSMUST00000191518 158 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm38008-201ENSMUST00000195333 518 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm43424-201ENSMUST00000200484 253 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm43090-201ENSMUST00000202459 314 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm8942-201ENSMUST00000217892 400 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.8□□□□□ -1.8
Cldn9Q9Z0S7 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm14816-201ENSMUST00000117174 294 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm13268-201ENSMUST00000117485 433 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm12230-201ENSMUST00000118301 454 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm13009-201ENSMUST00000121307 267 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm11931-201ENSMUST00000121630 447 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm23753-201ENSMUST00000157575 149 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm23554-201ENSMUST00000157818 110 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm21816-201ENSMUST00000179255 360 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Mir6938-201ENSMUST00000184173 63 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm27760-201ENSMUST00000185048 114 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm29598-201ENSMUST00000188996 588 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm43853-201ENSMUST00000197162 301 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm43604-201ENSMUST00000199799 705 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm45367-201ENSMUST00000210171 347 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm23518-201ENSMUST00000082835 153 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Mir370-201ENSMUST00000083499 79 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cldn9Q9Z0S7 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm11905-201ENSMUST00000117653 678 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm14172-201ENSMUST00000118255 644 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm11566-201ENSMUST00000118550 203 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm15313-201ENSMUST00000119179 282 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm15377-201ENSMUST00000119594 246 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm12884-201ENSMUST00000120371 325 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm14649-201ENSMUST00000121814 324 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm13366-201ENSMUST00000122198 970 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm13852-201ENSMUST00000122350 242 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm25104-201ENSMUST00000122476 163 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm25713-201ENSMUST00000158625 109 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm7241-201ENSMUST00000159853 357 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm2862-201ENSMUST00000161524 328 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm6245-201ENSMUST00000164699 768 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm27828-201ENSMUST00000184108 119 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm29334-201ENSMUST00000190334 357 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm44354-201ENSMUST00000196017 143 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm43308-201ENSMUST00000197236 373 ntBASIC3.78□□□□□ -1.8
Cldn9Q9Z0S7 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms