Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Samd15-201ENSMUST00000169669 1194 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm37193-201ENSMUST00000193087 513 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm43090-201ENSMUST00000202459 314 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm12448-201ENSMUST00000118852 655 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm13743-201ENSMUST00000121486 724 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm14916-201ENSMUST00000121904 204 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm17177-201ENSMUST00000169144 483 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Mir7074-201ENSMUST00000183884 63 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm6802-202ENSMUST00000186566 126 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm28615-201ENSMUST00000187527 482 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm29525-201ENSMUST00000189844 699 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm29523-201ENSMUST00000191415 699 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm43370-201ENSMUST00000196437 284 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm44665-201ENSMUST00000205381 251 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm7407-201ENSMUST00000208301 568 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Trim3Q9R1R2 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm23178-201ENSMUST00000116782 95 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm13550-201ENSMUST00000118185 525 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm14926-201ENSMUST00000120650 508 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm23789-201ENSMUST00000122536 301 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm25047-201ENSMUST00000122667 104 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm7846-201ENSMUST00000145844 274 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm21960-201ENSMUST00000181924 452 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm29534-201ENSMUST00000187328 382 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm43856-201ENSMUST00000197004 369 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm42566-201ENSMUST00000197120 643 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Mir7682-201ENSMUST00000198467 58 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm44002-201ENSMUST00000205134 594 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm44773-201ENSMUST00000207374 557 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm18320-201ENSMUST00000211304 595 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms