Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm23319-201ENSMUST00000104467 131 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm12427-201ENSMUST00000117719 302 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm11408-201ENSMUST00000117889 519 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm13737-201ENSMUST00000119793 232 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm5060-201ENSMUST00000120072 599 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm12486-201ENSMUST00000120887 541 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm13973-201ENSMUST00000121371 894 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm25104-201ENSMUST00000122476 163 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm26371-201ENSMUST00000157829 104 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm22314-201ENSMUST00000158007 281 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm24898-201ENSMUST00000158133 106 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm22135-201ENSMUST00000158752 108 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm4222-201ENSMUST00000165784 470 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm6650-201ENSMUST00000166710 614 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm22367-201ENSMUST00000178930 132 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm28471-201ENSMUST00000185994 615 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm28598-201ENSMUST00000186490 615 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm29268-201ENSMUST00000188669 615 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm19774-201ENSMUST00000190667 114 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm29218-205ENSMUST00000190846 615 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm28978-201ENSMUST00000191120 615 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm37172-201ENSMUST00000191926 615 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm38201-201ENSMUST00000192143 387 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm29815-201ENSMUST00000202418 178 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm45539-201ENSMUST00000210313 428 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm8748-201ENSMUST00000211125 587 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Mir28a-201ENSMUST00000083560 86 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.81□□□□□ -1.8
Cdc40Q9DC48 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm24792-201ENSMUST00000104286 128 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm12880-201ENSMUST00000120652 494 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm22453-201ENSMUST00000122801 318 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm25965-201ENSMUST00000157170 93 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm23959-201ENSMUST00000157208 324 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm25908-201ENSMUST00000157624 98 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm23499-201ENSMUST00000157736 268 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm24503-201ENSMUST00000158454 135 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm9890-201ENSMUST00000171867 537 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm45006-201ENSMUST00000206078 690 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm25005-201ENSMUST00000083812 156 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Cdc40Q9DC48 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.8□□□□□ -1.8
Cdc40Q9DC48 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cdc40Q9DC48 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdc40Q9DC48 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Cdc40Q9DC48 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdc40Q9DC48 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms