Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Snord65-201ENSMUST00000104269 72 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm14991-201ENSMUST00000119913 598 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm7618-201ENSMUST00000121643 171 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm12693-201ENSMUST00000121965 483 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm26148-201ENSMUST00000157430 68 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm15926-201ENSMUST00000120492 550 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm11692-201ENSMUST00000122121 902 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm26005-201ENSMUST00000158802 134 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm17887-201ENSMUST00000200194 547 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm7380-201ENSMUST00000211599 466 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm18487-201ENSMUST00000215826 878 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm18120-201ENSMUST00000220079 511 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm46996-201ENSMUST00000220924 408 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Mir193a-201ENSMUST00000083461 66 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Gm10704-201ENSMUST00000098952 730 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc3Q9D6Y1 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm25727-201ENSMUST00000104522 131 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm9427-201ENSMUST00000116187 651 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm15783-201ENSMUST00000117521 633 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm11829-201ENSMUST00000121003 282 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm3757-201ENSMUST00000125878 675 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm3160-201ENSMUST00000128343 607 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm26320-201ENSMUST00000157742 306 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm17155-201ENSMUST00000165969 473 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Spin2g-201ENSMUST00000178425 687 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Mir6385-201ENSMUST00000184295 105 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm28614-201ENSMUST00000186483 458 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm21139-201ENSMUST00000186594 877 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm5368-201ENSMUST00000189012 589 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm28500-201ENSMUST00000190286 151 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm37164-201ENSMUST00000192809 637 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm28724-202ENSMUST00000194218 295 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms