Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Gm9628-201ENSMUST00000222169 725 ntBASIC5.66□□□□□ -1.5
Stag1Q9D3E6 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Stag1Q9D3E6 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm22473-201ENSMUST00000104114 132 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm14577-201ENSMUST00000121134 256 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm12332-201ENSMUST00000121397 922 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm17060-201ENSMUST00000172394 824 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm20701-201ENSMUST00000176082 347 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Zfp950-206ENSMUST00000178819 171 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm42958-201ENSMUST00000197595 318 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm6261-201ENSMUST00000204707 760 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm44634-201ENSMUST00000206119 152 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm29920-201ENSMUST00000206876 754 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm45367-201ENSMUST00000210171 347 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm3086-202ENSMUST00000221248 310 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Stag1Q9D3E6 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Stag1Q9D3E6 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm13678-201ENSMUST00000118926 340 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm14688-201ENSMUST00000119169 303 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm11742-201ENSMUST00000119903 233 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm12383-201ENSMUST00000120628 760 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm22776-201ENSMUST00000178634 94 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm23767-201ENSMUST00000179278 94 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm18667-201ENSMUST00000186523 484 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm38008-201ENSMUST00000195333 518 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm43214-201ENSMUST00000199242 352 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm43841-201ENSMUST00000199491 586 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm42666-201ENSMUST00000201954 152 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm18258-201ENSMUST00000210413 542 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Mir421-201ENSMUST00000083575 76 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm10704-201ENSMUST00000098952 730 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.64□□□□□ -1.51
Stag1Q9D3E6 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms