Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm8217-201ENSMUST00000119136 465 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm11388-201ENSMUST00000120908 159 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm11507-201ENSMUST00000156462 412 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm23581-201ENSMUST00000158531 63 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm24081-201ENSMUST00000175177 125 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm17048-201ENSMUST00000179266 847 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm24306-201ENSMUST00000180229 79 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Mir7222-201ENSMUST00000183740 75 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Mir6238-201ENSMUST00000184140 129 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm27601-201ENSMUST00000184794 127 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm8823-201ENSMUST00000193158 433 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm4332-201ENSMUST00000196114 346 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm43405-201ENSMUST00000198642 337 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm43203-201ENSMUST00000200130 558 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm8039-201ENSMUST00000204758 712 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm45365-201ENSMUST00000209489 256 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm6012-201ENSMUST00000210821 730 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm8863-201ENSMUST00000216630 926 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Snord68-201ENSMUST00000082516 86 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm25133-201ENSMUST00000082647 130 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Snora30-201ENSMUST00000083325 130 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm24695-201ENSMUST00000083877 83 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.83□□□□□ -1.48
Trim42Q9D2H5 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm25213-201ENSMUST00000102388 113 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm26289-201ENSMUST00000104169 131 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm14876-201ENSMUST00000120795 327 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm5401-201ENSMUST00000122444 365 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm25706-201ENSMUST00000157828 247 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm22160-201ENSMUST00000158405 328 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm20698-201ENSMUST00000175657 233 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm37265-201ENSMUST00000191698 885 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm37495-201ENSMUST00000194590 264 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm44322-201ENSMUST00000196830 115 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm43354-201ENSMUST00000196862 346 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm43142-201ENSMUST00000198670 361 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm44316-201ENSMUST00000199274 97 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm44125-201ENSMUST00000203068 448 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm45026-201ENSMUST00000205292 833 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm19761-201ENSMUST00000205372 391 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm21112-201ENSMUST00000212224 578 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim42Q9D2H5 Gm24029-201ENSMUST00000083928 143 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms