Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm12568-201ENSMUST00000117362 624 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm11358-201ENSMUST00000122310 373 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm24944-201ENSMUST00000158330 128 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm23025-201ENSMUST00000158769 111 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm23059-201ENSMUST00000158978 107 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm25874-201ENSMUST00000178030 79 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29299-201ENSMUST00000185609 923 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29610-201ENSMUST00000187749 453 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29573-201ENSMUST00000190291 919 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm5983-201ENSMUST00000197739 770 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm18597-201ENSMUST00000209519 694 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm18924-201ENSMUST00000211929 316 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm6056-201ENSMUST00000221253 488 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Gm15227-201ENSMUST00000121844 399 ntBASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Gm23250-201ENSMUST00000157444 267 ntBASIC5.26□□□□□ -1.57
Ddx56Q9D0R4 Gm23318-201ENSMUST00000158000 108 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms