Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mir1193-201ENSMUST00000116761 121 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm13664-201ENSMUST00000117304 345 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm12427-201ENSMUST00000117719 302 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm15553-201ENSMUST00000118757 430 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm6565-201ENSMUST00000121217 438 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Trbv11-201ENSMUST00000194354 260 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm17780-201ENSMUST00000207142 612 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm44681-201ENSMUST00000208447 842 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm10042-201ENSMUST00000079884 78 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm6361-201ENSMUST00000091031 435 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Smc1aQ9CU62 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm5754-201ENSMUST00000118774 892 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm9078-201ENSMUST00000119126 617 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm23554-201ENSMUST00000157818 110 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm25971-201ENSMUST00000158953 286 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Mir5710-201ENSMUST00000176884 69 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm43765-201ENSMUST00000196303 893 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm6303-201ENSMUST00000210123 471 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm4263-202ENSMUST00000221392 667 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm23510-201ENSMUST00000083083 163 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.69□□□□□ -1.66
Smc1aQ9CU62 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm42968-201ENSMUST00000198578 1372 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Mir551b-201ENSMUST00000102165 98 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm11408-201ENSMUST00000117889 519 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm11262-201ENSMUST00000119326 833 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm14926-201ENSMUST00000120650 508 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm10444-201ENSMUST00000126708 148 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm10059-201ENSMUST00000131139 171 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm5876-201ENSMUST00000203735 243 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm45317-201ENSMUST00000210385 223 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms