Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Use1Q9CQ56 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm7421-201ENSMUST00000119298 639 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm7365-201ENSMUST00000120877 639 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm13419-201ENSMUST00000121711 271 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm26320-201ENSMUST00000157742 306 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm25971-201ENSMUST00000158953 286 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm29228-201ENSMUST00000185489 418 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm28997-201ENSMUST00000188759 429 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm7182-201ENSMUST00000193351 732 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm43295-201ENSMUST00000201439 412 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm18377-201ENSMUST00000215141 607 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm18871-201ENSMUST00000218655 745 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm46998-201ENSMUST00000221444 330 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm23928-201ENSMUST00000082469 145 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm23455-201ENSMUST00000083331 100 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.82□□□□□ -1.8
Use1Q9CQ56 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Use1Q9CQ56 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm12988-201ENSMUST00000119054 478 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm11719-201ENSMUST00000119399 351 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm13865-201ENSMUST00000120957 865 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm26085-201ENSMUST00000157900 116 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Scarna6-201ENSMUST00000158656 265 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm23152-201ENSMUST00000175322 116 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm27564-201ENSMUST00000185196 96 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm28267-201ENSMUST00000191093 265 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm43855-201ENSMUST00000197462 507 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Mir7682-201ENSMUST00000198467 58 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm34224-201ENSMUST00000204606 364 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Gm5649-201ENSMUST00000217918 951 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Use1Q9CQ56 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.81□□□□□ -1.8
Use1Q9CQ56 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms