Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm14926-201ENSMUST00000120650 508 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm7870-201ENSMUST00000184467 616 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm37140-201ENSMUST00000192914 1684 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm27374-201ENSMUST00000183660 81 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm29365-201ENSMUST00000189461 699 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm39147-201ENSMUST00000211376 465 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm25818-201ENSMUST00000083282 164 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm24289-201ENSMUST00000157629 135 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm24190-201ENSMUST00000157976 216 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm11970-201ENSMUST00000116105 320 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm13329-201ENSMUST00000117063 265 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm22958-201ENSMUST00000122512 184 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm24734-201ENSMUST00000158860 262 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm28781-201ENSMUST00000185760 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm28339-201ENSMUST00000185845 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm29574-201ENSMUST00000186226 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm28828-201ENSMUST00000186601 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm29307-201ENSMUST00000187367 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm28896-201ENSMUST00000188609 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm29339-201ENSMUST00000189613 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm28159-201ENSMUST00000190296 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm29407-201ENSMUST00000191468 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm38107-201ENSMUST00000194873 696 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm44308-201ENSMUST00000197080 99 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Gm44092-201ENSMUST00000204470 258 ntBASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdh23Q99PF4 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm4914-201ENSMUST00000119757 459 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm12001-201ENSMUST00000121727 913 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm28069-201ENSMUST00000189926 214 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm25203-202ENSMUST00000200458 216 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm25203-201ENSMUST00000082842 215 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm13386-201ENSMUST00000117677 124 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm24358-201ENSMUST00000158424 288 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm5983-201ENSMUST00000197739 770 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm44526-201ENSMUST00000204664 121 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms