Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm46138-201ENSMUST00000215294 426 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Olfr713-201ENSMUST00000098139 975 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm23175-201ENSMUST00000104371 132 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm14786-201ENSMUST00000117127 944 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm11350-201ENSMUST00000121436 870 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm12103-201ENSMUST00000121892 362 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm24636-201ENSMUST00000158673 288 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm25977-201ENSMUST00000158697 85 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm29097-201ENSMUST00000190273 422 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm44294-201ENSMUST00000205090 728 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm8748-201ENSMUST00000211125 587 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm4928-201ENSMUST00000219622 850 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 AC154730.1-201ENSMUST00000227874 816 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm8724-201ENSMUST00000081668 483 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm23925-201ENSMUST00000082471 132 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Mir34b-201ENSMUST00000083558 84 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm10704-201ENSMUST00000098952 730 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.17□□□□□ -1.74
Cstf1Q99LC2 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm15151-201ENSMUST00000117106 177 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm7834-201ENSMUST00000117560 437 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm12880-201ENSMUST00000120652 494 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm13677-201ENSMUST00000120739 595 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm12087-201ENSMUST00000121878 258 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm23168-201ENSMUST00000157156 143 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm22378-201ENSMUST00000157481 111 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm17109-201ENSMUST00000163985 358 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm23365-201ENSMUST00000175019 125 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm25960-201ENSMUST00000175110 125 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm44453-201ENSMUST00000175161 126 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm25195-201ENSMUST00000177656 126 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm28625-201ENSMUST00000188309 205 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm42539-201ENSMUST00000197009 308 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm43892-201ENSMUST00000204373 265 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm17811-201ENSMUST00000206193 387 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm17779-201ENSMUST00000213395 394 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm25739-201ENSMUST00000082886 107 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms