Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Mir7056-201ENSMUST00000183776 59 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm43171-201ENSMUST00000199882 291 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm44404-201ENSMUST00000203979 636 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm45458-201ENSMUST00000209900 522 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm18442-201ENSMUST00000220925 639 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 AC162857.1-201ENSMUST00000226614 400 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm26064-201ENSMUST00000083381 109 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Mir134-201ENSMUST00000083492 71 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Mir466n-201ENSMUST00000104798 94 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm16082-201ENSMUST00000115992 377 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm14050-201ENSMUST00000117052 346 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm13733-201ENSMUST00000117290 535 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm13603-201ENSMUST00000119404 83 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm14303-201ENSMUST00000121320 171 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm11834-201ENSMUST00000122257 585 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm23496-201ENSMUST00000157741 248 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm25942-201ENSMUST00000180080 110 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm27165-201ENSMUST00000183951 232 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm23925-202ENSMUST00000188429 132 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm37682-201ENSMUST00000191776 522 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm37272-201ENSMUST00000193401 488 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm18691-201ENSMUST00000203593 872 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm44054-201ENSMUST00000203814 372 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Gm6776-201ENSMUST00000057752 900 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.53□□□□□ -1.52
Brf1Q8CFK2 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm16589-201ENSMUST00000159522 918 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm29184-201ENSMUST00000190038 334 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 AC110380.1-201ENSMUST00000226987 389 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms