Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Mir5134-201ENSMUST00000175529 78 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm29320-201ENSMUST00000185235 615 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm29179-202ENSMUST00000186138 615 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm6947-201ENSMUST00000186254 78 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm29448-201ENSMUST00000186675 615 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm29314-201ENSMUST00000186800 615 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm28253-202ENSMUST00000187971 615 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm28625-201ENSMUST00000188309 205 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm29169-201ENSMUST00000189835 615 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm8790-201ENSMUST00000194108 322 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm38008-201ENSMUST00000195333 518 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm2314-201ENSMUST00000200391 586 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm20177-201ENSMUST00000203705 334 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm4052-201ENSMUST00000220890 451 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm23677-201ENSMUST00000083156 104 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc28aQ8CEI3 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ccdc28aQ8CEI3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ccdc28aQ8CEI3 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ccdc28aQ8CEI3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm23424-201ENSMUST00000103889 110 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm25726-201ENSMUST00000104529 129 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm6969-201ENSMUST00000140065 342 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm23957-201ENSMUST00000157209 90 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm24059-201ENSMUST00000157493 312 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm23554-201ENSMUST00000157818 110 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm28859-201ENSMUST00000186650 616 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm44259-201ENSMUST00000204996 298 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 AC166574.3-201ENSMUST00000226725 367 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Snord21-201ENSMUST00000082519 94 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.9□□□□□ -1.79
Ccdc28aQ8CEI3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm23585-201ENSMUST00000157656 102 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm25669-201ENSMUST00000157699 112 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm37710-201ENSMUST00000193501 1274 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm44607-201ENSMUST00000205611 1090 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Gm17829-201ENSMUST00000219782 344 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc28aQ8CEI3 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.88□□□□□ -1.79
Ccdc28aQ8CEI3 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc28aQ8CEI3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc28aQ8CEI3 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms