Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Gm22265-201ENSMUST00000082947 116 ntBASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Gm22351-201ENSMUST00000083925 107 ntBASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Scaf4Q6PFF0 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm23311-201ENSMUST00000104152 134 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm25917-201ENSMUST00000104267 130 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm11408-201ENSMUST00000117889 519 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm15772-201ENSMUST00000118533 438 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm14352-201ENSMUST00000119250 449 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm22599-201ENSMUST00000157597 132 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm22261-201ENSMUST00000158691 324 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm26426-201ENSMUST00000177866 123 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm23141-201ENSMUST00000178682 94 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm26060-201ENSMUST00000180094 123 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm20162-201ENSMUST00000193629 871 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm6510-201ENSMUST00000195916 574 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm43392-201ENSMUST00000196560 434 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm6719-201ENSMUST00000202067 335 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm44074-201ENSMUST00000204562 337 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm44820-201ENSMUST00000207420 396 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm23927-201ENSMUST00000082466 215 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm24207-201ENSMUST00000082781 108 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Scaf4Q6PFF0 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm24886-201ENSMUST00000104384 123 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm15781-201ENSMUST00000120216 323 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm22216-201ENSMUST00000157557 114 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm23964-201ENSMUST00000157966 107 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Gm25348-201ENSMUST00000158961 111 ntBASIC5.25□□□□□ -1.57
Scaf4Q6PFF0 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms