Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm45608-201ENSMUST00000210948 389 ntBASIC3.78□□□□□ -1.8
Vsx2Q61412 Gm45735-201ENSMUST00000212779 319 ntBASIC3.78□□□□□ -1.8
Vsx2Q61412 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.78□□□□□ -1.8
Vsx2Q61412 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.78□□□□□ -1.8
Vsx2Q61412 Gm46996-201ENSMUST00000220924 408 ntBASIC3.78□□□□□ -1.8
Vsx2Q61412 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.78□□□□□ -1.8
Vsx2Q61412 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.78□□□□□ -1.8
Vsx2Q61412 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Vsx2Q61412 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Vsx2Q61412 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Vsx2Q61412 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Vsx2Q61412 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Vsx2Q61412 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Vsx2Q61412 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Vsx2Q61412 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Vsx2Q61412 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.77□□□□□ -1.81
Vsx2Q61412 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm14299-201ENSMUST00000117586 397 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm15994-201ENSMUST00000118029 402 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm13170-201ENSMUST00000119716 643 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm7241-201ENSMUST00000159853 357 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm10067-201ENSMUST00000179462 348 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm29320-201ENSMUST00000185235 615 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm4854-201ENSMUST00000185902 574 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm29179-202ENSMUST00000186138 615 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm29448-201ENSMUST00000186675 615 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm29314-201ENSMUST00000186800 615 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm28253-202ENSMUST00000187971 615 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm3496-201ENSMUST00000188283 745 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm29169-201ENSMUST00000189835 615 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm37416-201ENSMUST00000193596 318 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Vsx2Q61412 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm45031-201ENSMUST00000206800 288 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm17829-201ENSMUST00000219782 344 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Gm25200-201ENSMUST00000083094 130 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Vsx2Q61412 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.77□□□□□ -1.81
Vsx2Q61412 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Vsx2Q61412 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Vsx2Q61412 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Vsx2Q61412 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm23133-201ENSMUST00000104255 135 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm15180-201ENSMUST00000117745 492 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm11673-201ENSMUST00000117846 331 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm11718-201ENSMUST00000119942 537 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm14875-201ENSMUST00000120881 319 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm13865-201ENSMUST00000120957 865 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm6565-201ENSMUST00000121217 438 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm11403-201ENSMUST00000122195 369 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm13852-201ENSMUST00000122350 242 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm22986-201ENSMUST00000122753 130 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm22158-201ENSMUST00000158411 126 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.76□□□□□ -1.81
Vsx2Q61412 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm37241-201ENSMUST00000191736 523 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Mir129b-201ENSMUST00000197461 65 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm2691-201ENSMUST00000203205 901 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Vsx2Q61412 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.76□□□□□ -1.81
Vsx2Q61412 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Vsx2Q61412 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Vsx2Q61412 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm26449-201ENSMUST00000082452 104 ntBASIC3.76□□□□□ -1.81
Vsx2Q61412 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.76□□□□□ -1.81
Vsx2Q61412 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Vsx2Q61412 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Vsx2Q61412 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Vsx2Q61412 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Vsx2Q61412 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Vsx2Q61412 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Vsx2Q61412 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms