Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm14541-201ENSMUST00000118985 157 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm13118-201ENSMUST00000120402 549 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm14605-201ENSMUST00000120599 268 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm6373-201ENSMUST00000121026 360 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm8244-201ENSMUST00000121254 264 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm26476-201ENSMUST00000122618 313 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm24850-201ENSMUST00000158029 119 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm16285-201ENSMUST00000162999 347 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm38201-201ENSMUST00000192143 387 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm38088-201ENSMUST00000195829 241 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm19726-201ENSMUST00000205008 240 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm5548-201ENSMUST00000055878 397 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm25481-201ENSMUST00000083221 158 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav5d-4Q5R1F6 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm25537-201ENSMUST00000103851 109 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm14890-201ENSMUST00000117660 676 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm8757-201ENSMUST00000119660 372 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm12577-201ENSMUST00000119701 574 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm12288-201ENSMUST00000121054 1282 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm22519-201ENSMUST00000158270 178 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm24503-201ENSMUST00000158454 135 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm25999-201ENSMUST00000175398 133 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm8641-201ENSMUST00000186995 826 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm20203-201ENSMUST00000192352 332 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm43440-201ENSMUST00000201957 729 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm45690-201ENSMUST00000210775 246 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm17829-201ENSMUST00000219782 344 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm6462-201ENSMUST00000081488 304 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav5d-4Q5R1F6 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms