Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Mir804-201ENSMUST00000103251 95 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm25537-201ENSMUST00000103851 109 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm13149-201ENSMUST00000122071 339 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm7840-201ENSMUST00000122086 533 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm3362-201ENSMUST00000148102 466 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm25383-201ENSMUST00000157810 144 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm25120-201ENSMUST00000180148 79 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm7634-201ENSMUST00000185778 553 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm18325-201ENSMUST00000203228 835 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm44952-201ENSMUST00000204443 433 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm20948-201ENSMUST00000211091 449 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 AC127279.1-201ENSMUST00000220140 637 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Mir17-201ENSMUST00000083574 84 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm23846-201ENSMUST00000083835 107 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm15180-201ENSMUST00000117745 492 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm13170-201ENSMUST00000119716 643 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm12808-201ENSMUST00000120597 404 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm11909-201ENSMUST00000121424 759 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm24188-201ENSMUST00000157980 108 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm24217-201ENSMUST00000158260 133 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm27849-201ENSMUST00000183673 125 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Mir6238-201ENSMUST00000184140 129 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm27952-201ENSMUST00000184748 105 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm29031-201ENSMUST00000185316 614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm29000-201ENSMUST00000185444 614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm28204-201ENSMUST00000185934 614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm28290-201ENSMUST00000186505 614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm28161-201ENSMUST00000186669 614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm28061-201ENSMUST00000189085 807 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm28749-209ENSMUST00000189599 614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm37111-201ENSMUST00000193250 634 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm33163-201ENSMUST00000194504 614 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm21006-201ENSMUST00000196930 667 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm43018-201ENSMUST00000198075 1275 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm44002-201ENSMUST00000205134 594 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm7443-201ENSMUST00000206355 378 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC3.94□□□□□ -1.78
Trim40Q3UWA4 Gm18585-201ENSMUST00000215197 556 ntBASIC3.94□□□□□ -1.78
Trim40Q3UWA4 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms