Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf3aQ3ULJ3 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.22□□□□□ -1.73
Upf3aQ3ULJ3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Upf3aQ3ULJ3 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Upf3aQ3ULJ3 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Upf3aQ3ULJ3 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Upf3aQ3ULJ3 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm24935-201ENSMUST00000103770 110 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm12465-201ENSMUST00000118591 300 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm11719-201ENSMUST00000119399 351 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm11982-201ENSMUST00000121480 314 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm26320-201ENSMUST00000157742 306 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Mir3473a-201ENSMUST00000175011 78 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm19761-201ENSMUST00000205372 391 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm8745-201ENSMUST00000207846 782 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Gm45162-201ENSMUST00000209013 618 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Upf3aQ3ULJ3 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm22514-201ENSMUST00000122547 308 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm25436-201ENSMUST00000158275 145 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm23116-201ENSMUST00000158481 67 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm27189-201ENSMUST00000184119 190 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm43124-201ENSMUST00000201878 278 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm7119-201ENSMUST00000221345 695 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm8231-201ENSMUST00000221617 783 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Snora7a-201ENSMUST00000082629 140 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Upf3aQ3ULJ3 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm24982-201ENSMUST00000104456 132 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm12311-201ENSMUST00000118803 374 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm12564-201ENSMUST00000119860 321 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm5060-201ENSMUST00000120072 599 ntBASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf3aQ3ULJ3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms