Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm26449-201ENSMUST00000082452 104 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm22543-201ENSMUST00000104347 94 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm14816-201ENSMUST00000117174 294 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm14621-201ENSMUST00000117709 689 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm12486-201ENSMUST00000120887 541 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm16327-201ENSMUST00000137146 228 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm23231-201ENSMUST00000157299 104 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm24745-201ENSMUST00000157840 85 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Atp2b4-208ENSMUST00000167348 243 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm25037-201ENSMUST00000175418 110 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm22367-201ENSMUST00000178930 132 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm21991-201ENSMUST00000180006 508 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm27636-201ENSMUST00000184528 122 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm28094-201ENSMUST00000185262 390 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm28438-201ENSMUST00000188299 345 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm37241-201ENSMUST00000191736 523 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm37837-201ENSMUST00000191743 604 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm18843-201ENSMUST00000194982 719 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm43892-201ENSMUST00000204373 265 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm26437-201ENSMUST00000082595 105 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trafd1Q3UDK1 Gm44434-201ENSMUST00000203918 3745 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trafd1Q3UDK1 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm11719-201ENSMUST00000119399 351 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm14363-201ENSMUST00000122304 409 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm22986-201ENSMUST00000122753 130 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Mir5106-201ENSMUST00000174936 73 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm26219-201ENSMUST00000175216 71 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm28997-201ENSMUST00000188759 429 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm3489-201ENSMUST00000190083 528 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm38018-201ENSMUST00000195651 540 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm43308-201ENSMUST00000197236 373 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm44817-201ENSMUST00000205416 453 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Platr25-208ENSMUST00000222602 939 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm43882-201ENSMUST00000204871 2264 ntBASIC4□□□□□ -1.77
Trafd1Q3UDK1 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trafd1Q3UDK1 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms