Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm23463-201ENSMUST00000122468 99 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm25783-201ENSMUST00000122525 190 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm12226-201ENSMUST00000144172 876 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm16326-201ENSMUST00000162843 414 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm20545-201ENSMUST00000174739 210 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Spin2g-201ENSMUST00000178425 687 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm27465-201ENSMUST00000184290 91 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm18453-201ENSMUST00000208000 626 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 AC152979.1-201ENSMUST00000218214 289 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 AC108802.1-201ENSMUST00000219501 3142 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm13821-201ENSMUST00000202029 3201 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm11550-201ENSMUST00000118210 699 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm13930-201ENSMUST00000118569 368 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 n-R5s80-201ENSMUST00000122596 111 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Mir1947-201ENSMUST00000158235 85 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm23209-201ENSMUST00000158667 110 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm17153-201ENSMUST00000171314 490 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm22548-201ENSMUST00000174899 78 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm28769-201ENSMUST00000190176 615 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm29140-201ENSMUST00000190187 476 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.4□□□□□ -1.38
Col9a1Q05722 AC130821.1-201ENSMUST00000221997 293 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 AC124729.1-201ENSMUST00000225327 976 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Snora30-201ENSMUST00000083325 130 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Mir31-201ENSMUST00000083474 106 ntBASIC6.4□□□□□ -1.38
Col9a1Q05722 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col9a1Q05722 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col9a1Q05722 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.4□□□□□ -1.39
Col9a1Q05722 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col9a1Q05722 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.4□□□□□ -1.39
Col9a1Q05722 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Col9a1Q05722 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col9a1Q05722 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col9a1Q05722 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col9a1Q05722 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col9a1Q05722 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col9a1Q05722 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col9a1Q05722 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col9a1Q05722 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm14429-201ENSMUST00000121881 2024 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 AC153526.2-201ENSMUST00000218206 2031 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm25538-201ENSMUST00000101943 107 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm25875-201ENSMUST00000104323 107 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm14876-201ENSMUST00000120795 327 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm14846-201ENSMUST00000121868 216 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm25487-201ENSMUST00000158725 125 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm6214-201ENSMUST00000178845 541 ntBASIC6.39□□□□□ -1.39
Col9a1Q05722 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC6.39□□□□□ -1.39
Col9a1Q05722 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms