Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.74□□□□□ -1.65
Col8a1Q00780 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm23626-201ENSMUST00000082458 133 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm24763-201ENSMUST00000083688 190 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm22365-201ENSMUST00000093750 117 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm38118-201ENSMUST00000192052 2222 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm45548-201ENSMUST00000210076 3167 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm11561-201ENSMUST00000117429 417 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm12230-201ENSMUST00000118301 454 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm4234-201ENSMUST00000119747 714 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm14269-201ENSMUST00000120455 306 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm11825-201ENSMUST00000120710 736 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm12732-201ENSMUST00000121688 180 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm14972-201ENSMUST00000121780 364 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm24059-201ENSMUST00000157493 312 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm24729-201ENSMUST00000158225 137 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm27803-201ENSMUST00000183763 119 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Mir6899-201ENSMUST00000184798 64 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm28683-201ENSMUST00000187134 615 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm28840-205ENSMUST00000189320 615 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm28835-203ENSMUST00000190062 615 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm37961-201ENSMUST00000192729 299 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm37164-201ENSMUST00000192809 637 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm43524-201ENSMUST00000197278 298 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm2142-201ENSMUST00000197899 589 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm44463-201ENSMUST00000198895 137 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm45814-201ENSMUST00000212646 775 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm20304-201ENSMUST00000218168 444 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 AC124420.1-201ENSMUST00000219779 791 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm45426-201ENSMUST00000209393 3672 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a1Q00780 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.73□□□□□ -1.65
Col8a1Q00780 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Col8a1Q00780 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col8a1Q00780 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.72□□□□□ -1.65
Col8a1Q00780 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms