Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC149588.1-201ENSMUST00000228274 3745 ntBASIC2.56□□□□□ -2
PrkdcP97313 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC2.56□□□□□ -2
PrkdcP97313 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm44587-201ENSMUST00000207399 1685 ntBASIC2.56□□□□□ -2
PrkdcP97313 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC2.56□□□□□ -2
PrkdcP97313 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
PrkdcP97313 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PrkdcP97313 Gm11869-201ENSMUST00000118701 329 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm15387-201ENSMUST00000120421 648 ntBASIC2.56□□□□□ -2
PrkdcP97313 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm18522-201ENSMUST00000173947 650 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm26746-201ENSMUST00000181722 487 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC2.56□□□□□ -2
PrkdcP97313 Gm44399-201ENSMUST00000205043 226 ntBASIC2.56□□□□□ -2
PrkdcP97313 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Gm5518-201ENSMUST00000084171 648 ntBASIC2.56□□□□□ -2
PrkdcP97313 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC2.56□□□□□ -2
PrkdcP97313 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.56□□□□□ -2
PrkdcP97313 Gm11566-201ENSMUST00000118550 203 ntBASIC2.56□□□□□ -2
PrkdcP97313 Klra11-ps-201ENSMUST00000122033 810 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm45252-201ENSMUST00000211579 397 ntBASIC2.56□□□□□ -2
PrkdcP97313 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm19095-201ENSMUST00000220533 730 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 AC162908.1-201ENSMUST00000219164 4563 ntBASIC2.55□□□□□ -2
PrkdcP97313 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Gm26041-201ENSMUST00000158148 108 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm37533-201ENSMUST00000193848 545 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC2.55□□□□□ -2
PrkdcP97313 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.55□□□□□ -2
PrkdcP97313 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.55□□□□□ -2
PrkdcP97313 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
PrkdcP97313 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC2.55□□□□□ -2
PrkdcP97313 Gm5117-201ENSMUST00000178878 2553 ntBASIC2.55□□□□□ -2
PrkdcP97313 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC2.55□□□□□ -2
PrkdcP97313 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC2.55□□□□□ -2
PrkdcP97313 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Gm37140-201ENSMUST00000192914 1684 ntBASIC2.55□□□□□ -2
PrkdcP97313 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Gm11830-201ENSMUST00000120175 561 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC2.55□□□□□ -2
PrkdcP97313 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm24441-201ENSMUST00000157235 281 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm24190-201ENSMUST00000157976 216 ntBASIC2.55□□□□□ -2
PrkdcP97313 Trbv8-201ENSMUST00000194020 285 ntBASIC2.55□□□□□ -2
PrkdcP97313 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.55□□□□□ -2
PrkdcP97313 Mir34b-201ENSMUST00000083558 84 ntBASIC2.55□□□□□ -2
PrkdcP97313 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PrkdcP97313 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Gm42992-201ENSMUST00000197043 6836 ntBASIC2.55□□□□□ -2
PrkdcP97313 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
PrkdcP97313 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC2.55□□□□□ -2
PrkdcP97313 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Gm13677-201ENSMUST00000120739 595 ntBASIC2.55□□□□□ -2
PrkdcP97313 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm29563-201ENSMUST00000187249 496 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm28967-201ENSMUST00000187351 281 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm19030-201ENSMUST00000194947 552 ntBASIC2.55□□□□□ -2
PrkdcP97313 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC2.55□□□□□ -2
PrkdcP97313 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Gm43668-201ENSMUST00000197014 5342 ntBASIC2.55□□□□□ -2
PrkdcP97313 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.55□□□□□ -2
PrkdcP97313 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC2.55□□□□□ -2
PrkdcP97313 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PrkdcP97313 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
PrkdcP97313 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms