Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Traf1P39428 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.99□□□□□ -1.61
Traf1P39428 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Traf1P39428 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Traf1P39428 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.98□□□□□ -1.61
Traf1P39428 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Traf1P39428 Gm5963-201ENSMUST00000143451 236 ntBASIC4.98□□□□□ -1.61
Traf1P39428 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.98□□□□□ -1.61
Traf1P39428 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.98□□□□□ -1.61
Traf1P39428 Gm25427-201ENSMUST00000157605 103 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Traf1P39428 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm29320-201ENSMUST00000185235 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm28471-201ENSMUST00000185994 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm29179-202ENSMUST00000186138 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm28598-201ENSMUST00000186490 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm29448-201ENSMUST00000186675 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm29314-201ENSMUST00000186800 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm28253-202ENSMUST00000187971 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.98□□□□□ -1.61
Traf1P39428 Gm29268-201ENSMUST00000188669 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm29169-201ENSMUST00000189835 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm29428-201ENSMUST00000190086 409 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm29218-205ENSMUST00000190846 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm28978-201ENSMUST00000191120 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm37172-201ENSMUST00000191926 615 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm43774-201ENSMUST00000196327 878 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm43930-201ENSMUST00000203868 845 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Traf1P39428 Gm18855-201ENSMUST00000206689 570 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm5338-201ENSMUST00000209530 639 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Traf1P39428 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.98□□□□□ -1.61
Traf1P39428 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.98□□□□□ -1.61
Traf1P39428 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Traf1P39428 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Traf1P39428 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Traf1P39428 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Traf1P39428 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Traf1P39428 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Traf1P39428 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Traf1P39428 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Traf1P39428 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm22758-201ENSMUST00000102275 96 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm5384-201ENSMUST00000120313 463 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm11398-201ENSMUST00000120330 320 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm11506-201ENSMUST00000122414 470 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm10059-201ENSMUST00000131139 171 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm4487-201ENSMUST00000150617 442 ntBASIC4.97□□□□□ -1.61
Traf1P39428 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 Gm23959-201ENSMUST00000157208 324 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm23554-201ENSMUST00000157818 110 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.97□□□□□ -1.61
Traf1P39428 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.97□□□□□ -1.61
Traf1P39428 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm38008-201ENSMUST00000195333 518 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 Gm18645-202ENSMUST00000212222 760 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Gm7639-201ENSMUST00000212608 484 ntBASIC4.97□□□□□ -1.61
Traf1P39428 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Traf1P39428 Gm19599-201ENSMUST00000218898 358 ntBASIC4.97□□□□□ -1.61
Traf1P39428 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.97□□□□□ -1.61
Traf1P39428 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Traf1P39428 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Traf1P39428 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.97□□□□□ -1.61
Traf1P39428 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Traf1P39428 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.96□□□□□ -1.61
Traf1P39428 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.96□□□□□ -1.61
Traf1P39428 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Traf1P39428 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Traf1P39428 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Traf1P39428 Gm24788-201ENSMUST00000104283 156 ntBASIC4.96□□□□□ -1.62
Traf1P39428 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms