Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.67□□□□□ -1.82
P20040 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.67□□□□□ -1.82
P20040 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.67□□□□□ -1.82
P20040 AC158388.1-201ENSMUST00000225441 256 ntBASIC3.67□□□□□ -1.82
P20040 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
P20040 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.67□□□□□ -1.82
P20040 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.67□□□□□ -1.82
P20040 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
P20040 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
P20040 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
P20040 Synpr-207ENSMUST00000223583 3362 ntBASIC3.67□□□□□ -1.82
P20040 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.67□□□□□ -1.82
P20040 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.67□□□□□ -1.82
P20040 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
P20040 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
P20040 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.66□□□□□ -1.82
P20040 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.66□□□□□ -1.82
P20040 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.66□□□□□ -1.82
P20040 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.66□□□□□ -1.82
P20040 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
P20040 Gm23424-201ENSMUST00000103889 110 ntBASIC3.66□□□□□ -1.82
P20040 Gm11698-201ENSMUST00000117948 455 ntBASIC3.66□□□□□ -1.82
P20040 Gm12994-201ENSMUST00000119601 447 ntBASIC3.66□□□□□ -1.82
P20040 Gm5384-201ENSMUST00000120313 463 ntBASIC3.66□□□□□ -1.82
P20040 Gm15120-201ENSMUST00000120602 301 ntBASIC3.66□□□□□ -1.82
P20040 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.66□□□□□ -1.82
P20040 Gm14916-201ENSMUST00000121904 204 ntBASIC3.66□□□□□ -1.82
P20040 Gm14840-201ENSMUST00000122135 594 ntBASIC3.66□□□□□ -1.82
P20040 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.66□□□□□ -1.82
P20040 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.66□□□□□ -1.82
P20040 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm28615-201ENSMUST00000187527 482 ntBASIC3.66□□□□□ -1.82
P20040 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.66□□□□□ -1.82
P20040 Gm29479-201ENSMUST00000190352 455 ntBASIC3.66□□□□□ -1.82
P20040 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.66□□□□□ -1.82
P20040 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.66□□□□□ -1.82
P20040 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.66□□□□□ -1.82
P20040 Mir5121-201ENSMUST00000198528 74 ntBASIC3.66□□□□□ -1.82
P20040 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.66□□□□□ -1.82
P20040 Gm9245-201ENSMUST00000200528 983 ntBASIC3.66□□□□□ -1.82
P20040 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.66□□□□□ -1.82
P20040 Gm44059-201ENSMUST00000204048 351 ntBASIC3.66□□□□□ -1.82
P20040 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.66□□□□□ -1.82
P20040 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.66□□□□□ -1.82
P20040 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
P20040 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
P20040 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm6462-201ENSMUST00000081488 304 ntBASIC3.66□□□□□ -1.82
P20040 Gm22005-201ENSMUST00000082795 141 ntBASIC3.66□□□□□ -1.82
P20040 Snord22-201ENSMUST00000083153 126 ntBASIC3.66□□□□□ -1.82
P20040 Mir383-201ENSMUST00000083523 70 ntBASIC3.66□□□□□ -1.82
P20040 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
P20040 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
P20040 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
P20040 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.66□□□□□ -1.82
P20040 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.66□□□□□ -1.82
P20040 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
P20040 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.66□□□□□ -1.82
P20040 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.66□□□□□ -1.82
P20040 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
P20040 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
P20040 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.65□□□□□ -1.82
P20040 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.65□□□□□ -1.82
P20040 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
P20040 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.65□□□□□ -1.82
P20040 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.65□□□□□ -1.82
P20040 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
P20040 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
P20040 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
P20040 Gm24125-201ENSMUST00000104105 137 ntBASIC3.65□□□□□ -1.83
P20040 Gm23178-201ENSMUST00000116782 95 ntBASIC3.65□□□□□ -1.83
P20040 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.65□□□□□ -1.83
P20040 Gm13557-201ENSMUST00000120771 382 ntBASIC3.65□□□□□ -1.83
P20040 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.65□□□□□ -1.83
P20040 Gm4487-201ENSMUST00000150617 442 ntBASIC3.65□□□□□ -1.83
P20040 Gm23905-201ENSMUST00000157568 109 ntBASIC3.65□□□□□ -1.83
P20040 Gm23499-201ENSMUST00000157736 268 ntBASIC3.65□□□□□ -1.83
P20040 Gm23781-201ENSMUST00000157940 308 ntBASIC3.65□□□□□ -1.83
P20040 Gm16558-201ENSMUST00000163015 532 ntBASIC3.65□□□□□ -1.83
P20040 Gm27155-201ENSMUST00000183716 898 ntBASIC3.65□□□□□ -1.83
P20040 Mir7074-201ENSMUST00000183884 63 ntBASIC3.65□□□□□ -1.83
P20040 Gm27427-201ENSMUST00000185134 193 ntBASIC3.65□□□□□ -1.83
P20040 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.65□□□□□ -1.83
P20040 Gm19503-201ENSMUST00000187109 241 ntBASIC3.65□□□□□ -1.83
P20040 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.65□□□□□ -1.83
P20040 Gm43440-201ENSMUST00000201957 729 ntBASIC3.65□□□□□ -1.83
P20040 Gm17987-201ENSMUST00000206902 603 ntBASIC3.65□□□□□ -1.83
P20040 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms