Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm10410-201ENSMUST00000180138 384 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Mir7082-201ENSMUST00000183526 92 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm43354-201ENSMUST00000196862 346 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm7780-201ENSMUST00000214787 406 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 AC115793.1-201ENSMUST00000216605 215 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC4.98□□□□□ -1.61
Hoxd3P09027 AC170086.2-201ENSMUST00000224733 803 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm19368-201ENSMUST00000221258 4424 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm23311-201ENSMUST00000104152 134 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 n-R5s178-201ENSMUST00000104249 114 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm25346-201ENSMUST00000104509 128 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm8424-201ENSMUST00000117716 988 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm14142-201ENSMUST00000117833 296 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm12231-201ENSMUST00000119447 695 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm13239-201ENSMUST00000119920 637 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm15696-201ENSMUST00000121730 445 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Rps29-ps-201ENSMUST00000122083 172 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm17020-201ENSMUST00000172274 274 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm22548-201ENSMUST00000174899 78 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm22114-201ENSMUST00000177756 107 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm23725-201ENSMUST00000177876 107 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm5368-201ENSMUST00000189012 589 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.97□□□□□ -1.61
Hoxd3P09027 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm2996-201ENSMUST00000211398 537 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC4.97□□□□□ -1.61
Hoxd3P09027 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.97□□□□□ -1.61
Hoxd3P09027 AC134917.2-201ENSMUST00000223354 124 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 AV026068-216ENSMUST00000223874 328 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 AC113031.1-201ENSMUST00000227400 432 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm23645-201ENSMUST00000083228 108 ntBASIC4.97□□□□□ -1.61
Hoxd3P09027 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxd3P09027 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxd3P09027 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms