Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cbx4O55187 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cbx4O55187 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.47□□□□□ -1.69
Cbx4O55187 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.47□□□□□ -1.69
Cbx4O55187 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.47□□□□□ -1.69
Cbx4O55187 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.47□□□□□ -1.69
Cbx4O55187 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Cbx4O55187 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.69
Cbx4O55187 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Cbx4O55187 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.46□□□□□ -1.69
Cbx4O55187 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cbx4O55187 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cbx4O55187 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cbx4O55187 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm22498-201ENSMUST00000104497 86 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm11914-201ENSMUST00000117094 507 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm13733-201ENSMUST00000117290 535 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm8858-201ENSMUST00000118259 342 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm15168-201ENSMUST00000121057 316 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm13555-201ENSMUST00000121668 319 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm26034-201ENSMUST00000158154 116 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm26354-201ENSMUST00000158221 129 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm5929-201ENSMUST00000166883 487 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.46□□□□□ -1.7
Cbx4O55187 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm29138-201ENSMUST00000191444 348 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm38150-201ENSMUST00000192996 452 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm18327-201ENSMUST00000202426 830 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm44054-201ENSMUST00000203814 372 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm45007-201ENSMUST00000206237 366 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm45857-201ENSMUST00000212207 356 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm46136-201ENSMUST00000214730 565 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cbx4O55187 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cbx4O55187 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
Cbx4O55187 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.46□□□□□ -1.7
Cbx4O55187 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cbx4O55187 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Fus-202ENSMUST00000079045 2623 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Cbx4O55187 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm24855-201ENSMUST00000104848 97 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm15382-201ENSMUST00000118011 537 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm14861-201ENSMUST00000119451 455 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm5943-201ENSMUST00000119458 459 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm14500-201ENSMUST00000121647 113 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm7846-201ENSMUST00000145844 274 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm22312-201ENSMUST00000158005 130 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm24551-201ENSMUST00000158645 92 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm16134-201ENSMUST00000161714 336 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm17154-201ENSMUST00000165748 431 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.45□□□□□ -1.7
Cbx4O55187 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cbx4O55187 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.45□□□□□ -1.7
Cbx4O55187 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.45□□□□□ -1.7
Cbx4O55187 Gm33973-201ENSMUST00000195148 534 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm44181-201ENSMUST00000203106 483 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm44135-201ENSMUST00000205221 368 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm45409-201ENSMUST00000211486 252 ntBASIC4.45□□□□□ -1.7
Cbx4O55187 Gm45379-201ENSMUST00000211772 549 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms