Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm24544-201ENSMUST00000103862 110 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm14975-201ENSMUST00000118741 664 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm14739-201ENSMUST00000120424 802 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm45080-201ENSMUST00000206648 283 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gm44824-201ENSMUST00000207021 229 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Scn3aA2ASI5 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm25272-201ENSMUST00000104293 128 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm15387-201ENSMUST00000120421 648 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm23666-201ENSMUST00000158053 116 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm26141-201ENSMUST00000175299 126 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm5829-201ENSMUST00000191383 351 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm5518-201ENSMUST00000084171 648 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Scn3aA2ASI5 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.14□□□□□ -1.75
Scn3aA2ASI5 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm14816-201ENSMUST00000117174 294 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm23123-201ENSMUST00000157648 144 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm24727-201ENSMUST00000158231 144 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm44694-201ENSMUST00000205317 1298 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm11746-201ENSMUST00000119843 821 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Scn3aA2ASI5 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm23753-201ENSMUST00000157575 149 ntBASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm5058-201ENSMUST00000187331 463 ntBASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Scn3aA2ASI5 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms