Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm11912-201ENSMUST00000117235 264 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm12102-201ENSMUST00000118251 604 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm8061-201ENSMUST00000122380 350 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm27976-201ENSMUST00000183635 162 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm37070-201ENSMUST00000193272 460 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm36939-201ENSMUST00000194889 439 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm43276-201ENSMUST00000199712 364 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm43578-201ENSMUST00000201250 459 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm4714-201ENSMUST00000203395 279 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm32453-201ENSMUST00000204183 456 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm44254-201ENSMUST00000204184 322 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Mir421-201ENSMUST00000083575 76 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb3S4R1G7 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
H2afb3S4R1G7 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
H2afb3S4R1G7 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
H2afb3S4R1G7 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
H2afb3S4R1G7 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.4□□□□□ -1.7
H2afb3S4R1G7 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.4□□□□□ -1.7
H2afb3S4R1G7 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.4□□□□□ -1.7
H2afb3S4R1G7 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm22072-201ENSMUST00000116850 121 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm8595-201ENSMUST00000118250 630 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm14871-201ENSMUST00000119056 194 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm15357-201ENSMUST00000119160 285 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm14861-201ENSMUST00000119451 455 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm16445-201ENSMUST00000120399 714 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm5646-201ENSMUST00000120568 714 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm15166-201ENSMUST00000120790 385 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm22343-201ENSMUST00000122648 286 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm16318-201ENSMUST00000162402 601 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm17421-201ENSMUST00000167845 674 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm21754-201ENSMUST00000177550 479 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm15143-201ENSMUST00000178180 714 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm23269-201ENSMUST00000178701 107 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm27602-201ENSMUST00000183861 111 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Mir6400-201ENSMUST00000184870 92 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm29610-201ENSMUST00000187749 453 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm28957-201ENSMUST00000190174 373 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm42438-201ENSMUST00000197832 974 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm42818-201ENSMUST00000198869 987 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm31230-201ENSMUST00000199725 785 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm2314-201ENSMUST00000200391 586 ntBASIC4.4□□□□□ -1.71
H2afb3S4R1G7 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.4□□□□□ -1.71
H2afb3S4R1G7 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms