Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm26367-201ENSMUST00000104165 132 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm11698-201ENSMUST00000117948 455 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm16250-201ENSMUST00000148974 256 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm8823-201ENSMUST00000193158 433 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm19131-201ENSMUST00000203408 789 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim3Q9R1R2 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm23942-201ENSMUST00000101956 107 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Mir761-201ENSMUST00000103245 76 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm22472-201ENSMUST00000104115 134 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm13664-201ENSMUST00000117304 345 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm14541-201ENSMUST00000118985 157 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm11262-201ENSMUST00000119326 833 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm12880-201ENSMUST00000120652 494 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm13865-201ENSMUST00000120957 865 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm15141-201ENSMUST00000121860 729 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm10444-201ENSMUST00000126708 148 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm23702-201ENSMUST00000158840 130 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm16571-201ENSMUST00000159112 291 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Mir6938-201ENSMUST00000184173 63 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm38234-201ENSMUST00000195204 421 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm43774-201ENSMUST00000196327 878 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Mir5121-201ENSMUST00000198528 74 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm6863-201ENSMUST00000052882 636 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.97□□□□□ -1.77
Trim3Q9R1R2 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.97□□□□□ -1.77
Trim3Q9R1R2 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Trim3Q9R1R2 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Trim3Q9R1R2 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.96□□□□□ -1.77
Trim3Q9R1R2 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Trim3Q9R1R2 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm24125-201ENSMUST00000104105 137 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm23959-201ENSMUST00000157208 324 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm23499-201ENSMUST00000157736 268 ntBASIC3.96□□□□□ -1.78
Trim3Q9R1R2 Gm16558-201ENSMUST00000163015 532 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms