Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm9457-201ENSMUST00000180176 372 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm18482-201ENSMUST00000202405 760 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm44336-201ENSMUST00000203696 468 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm18541-201ENSMUST00000215935 538 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 AC145736.2-201ENSMUST00000216305 365 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm7540-201ENSMUST00000219764 926 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 AC131029.2-202ENSMUST00000228430 496 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm8724-201ENSMUST00000081668 483 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ube3bQ9ES34 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm15177-201ENSMUST00000120491 577 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm12732-201ENSMUST00000121688 180 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm15147-201ENSMUST00000122263 483 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm23465-201ENSMUST00000157134 262 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm25341-201ENSMUST00000157461 268 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Mir5110-201ENSMUST00000175537 87 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm18117-201ENSMUST00000187720 742 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm9480-201ENSMUST00000198038 616 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm44108-201ENSMUST00000203525 422 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm45156-201ENSMUST00000207255 439 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm45434-201ENSMUST00000210550 293 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm24410-201ENSMUST00000083433 107 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ube3bQ9ES34 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm7189-201ENSMUST00000119811 429 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm12691-201ENSMUST00000120186 456 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm22219-201ENSMUST00000157562 319 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm25489-201ENSMUST00000158727 141 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm23966-201ENSMUST00000179823 107 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm6501-201ENSMUST00000187178 916 ntBASIC6.84□□□□□ -1.31
Ube3bQ9ES34 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms