Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm19807-201ENSMUST00000173971 667 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm22917-201ENSMUST00000180116 110 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm21070-201ENSMUST00000182425 985 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm38270-201ENSMUST00000192721 407 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm43370-201ENSMUST00000196437 284 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm4248-201ENSMUST00000196905 316 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm4644-201ENSMUST00000197587 400 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 AV026068-224ENSMUST00000224827 928 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 AC131117.2-203ENSMUST00000225886 950 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 BC023105-201ENSMUST00000073997 1227 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.84□□□□□ -1.8
Lima1Q9ERG0 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Lima1Q9ERG0 Gm44624-201ENSMUST00000208700 2278 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm23697-201ENSMUST00000103897 110 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm13831-201ENSMUST00000118764 302 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm9078-201ENSMUST00000119126 617 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm11510-201ENSMUST00000120278 347 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm14229-201ENSMUST00000121178 850 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm25177-201ENSMUST00000122634 117 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm25913-201ENSMUST00000157617 135 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm23591-201ENSMUST00000157663 286 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm24739-201ENSMUST00000158855 292 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm5974-201ENSMUST00000181607 986 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Mir6391-201ENSMUST00000184391 104 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Mir6986-201ENSMUST00000184483 58 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm28596-201ENSMUST00000185870 696 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm32295-201ENSMUST00000192558 696 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm31260-201ENSMUST00000193478 696 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm9722-201ENSMUST00000194568 802 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm25800-201ENSMUST00000082636 134 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Snora31-201ENSMUST00000083213 130 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.83□□□□□ -1.8
Lima1Q9ERG0 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm26273-201ENSMUST00000104180 131 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm23319-201ENSMUST00000104467 131 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm12885-201ENSMUST00000122246 328 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm24930-201ENSMUST00000158315 83 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm25606-201ENSMUST00000158363 95 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm16571-201ENSMUST00000159112 291 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Gm22395-201ENSMUST00000177427 96 ntBASIC3.82□□□□□ -1.8
Lima1Q9ERG0 Mir6374-201ENSMUST00000184003 107 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms