Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm38234-201ENSMUST00000195204 421 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Mir703-201ENSMUST00000197105 109 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm42999-201ENSMUST00000198049 786 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Trav12-4-201ENSMUST00000200663 271 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm18306-201ENSMUST00000207338 569 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 CT573422.1-201ENSMUST00000216655 405 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm15090-201ENSMUST00000118787 1196 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm15785-201ENSMUST00000119145 694 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm14591-201ENSMUST00000120407 518 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm11448-201ENSMUST00000120427 450 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm13557-201ENSMUST00000120771 382 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm14303-201ENSMUST00000121320 171 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm13471-201ENSMUST00000122057 433 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm15089-201ENSMUST00000122332 1196 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm4725-201ENSMUST00000151048 587 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm23496-201ENSMUST00000157741 248 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm25981-201ENSMUST00000157921 295 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm15796-201ENSMUST00000162135 204 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm24080-201ENSMUST00000175178 232 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm22243-201ENSMUST00000178754 120 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm43440-201ENSMUST00000201957 729 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gm17811-201ENSMUST00000206193 387 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Mecom-201ENSMUST00000061088 348 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps28Q9D1C8 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm23948-201ENSMUST00000104030 132 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm11914-201ENSMUST00000117094 507 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm14688-201ENSMUST00000119169 303 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm14534-201ENSMUST00000120045 357 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm16129-201ENSMUST00000152628 486 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm23501-201ENSMUST00000157744 256 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm3084-201ENSMUST00000169967 598 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm22859-201ENSMUST00000174978 122 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Mir6963-201ENSMUST00000183535 71 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm27522-201ENSMUST00000183949 230 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm37878-201ENSMUST00000192108 387 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm20203-201ENSMUST00000192352 332 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm37881-201ENSMUST00000193001 421 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm37670-201ENSMUST00000193622 229 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm44681-201ENSMUST00000208447 842 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms