Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm26002-201ENSMUST00000101915 107 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm25418-201ENSMUST00000104214 129 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm12393-201ENSMUST00000117084 848 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm15176-201ENSMUST00000117734 135 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm11268-201ENSMUST00000118347 267 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm15312-201ENSMUST00000118827 271 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm12044-201ENSMUST00000120335 213 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm15309-201ENSMUST00000121644 240 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm24371-201ENSMUST00000122662 267 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm26490-201ENSMUST00000157879 140 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm25606-201ENSMUST00000158363 95 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Mir7222-201ENSMUST00000183740 75 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm28552-201ENSMUST00000190725 388 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm42828-201ENSMUST00000199669 469 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm31230-201ENSMUST00000199725 785 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm33601-201ENSMUST00000210001 961 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm45742-201ENSMUST00000212400 433 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Clec2j-201ENSMUST00000032517 515 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm26163-201ENSMUST00000083792 178 ntBASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ddx56Q9D0R4 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ddx56Q9D0R4 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms